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Data from: Visualizing Plant Responses: Novel Insights Possible through Affordable Imaging Techniques in the Greenhouse

Metadata Updated: April 21, 2025

Data of image calculation averages, coefficient of variations, and experimental measurements that were presented in the manuscript, Visualizing Plant Responses: Novel Insights Possible through Affordable Imaging Techniques in the Greenhouse, is provided.Abstract: Global climatic pressures and increased human demands create a modern necessity for efficient and affordable plant phenotyping unencumbered by arduous technical requirements. The analysis and archival of imagery have become easier as modern camera technology and computers are leveraged. This facilitates the detection of vegetation status and changes over time. Using a custom lightbox, an inexpensive camera, and common software, turfgrass pots were photographed in a greenhouse environment over an 8-week experiment period. Subsequent imagery was analyzed for area of cover, color metrics, and sensitivity to image corrections. Findings were compared to active spectral reflectance data and previously reported measurements of visual quality, productivity, and water use. Results indicate that Red Green Blue-based (RGB) imagery with simple controls is sufficient to measure the effects of plant treatments. Notable correlations were observed for corrected imagery, including between a percent yellow color area classification segment (%Y) with human visual quality ratings (VQ) (R = -0.89), the dark green color index (DGCI) with clipping productivity in mg d-1 (mg) (R = 0.61), and an index combination term (COMB2) with water use in mm d-1 (mm) (R = -0.60). The calculation of green cover area (%G) correlated with Normalized Difference Vegetation Index (NDVI) (R = 0.91) and its RED reflectance spectra (R = -0.87). A CIELAB b/a chromatic ratio (BA) correlated with Normalized Difference Red-Edge index (NDRE) (R = 0.90), and its Red-Edge (RE) (R = -0.74) reflectance spectra, while a new calculation termed HSVi correlated strongest to the Near-Infrared (NIR) (R = 0.90) reflectance spectra. Additionally, COMB2 significantly differentiated between the treatment effects of date, mowing height, deficit irrigation, and their interactions (p < 0.001). Sensitivity and statistical analysis of typical image file formats and corrections that included JPEG (JPG), TIFF (TIF), geometric lens correction (LC), and color correction (CC) were conducted. Results underscore the need for further research to support image corrections standardization and better connect image data to biological processes. This study demonstrates the potential of consumer-grade photography to capture plant phenotypic traits.

Access & Use Information

Public: This dataset is intended for public access and use. License: Creative Commons Attribution

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Dates

Metadata Created Date November 2, 2024
Metadata Updated Date April 21, 2025
Data Update Frequency R/P1W

Metadata Source

Harvested from USDA JSON

Additional Metadata

Resource Type Dataset
Metadata Created Date November 2, 2024
Metadata Updated Date April 21, 2025
Publisher Agricultural Research Service
Maintainer
Identifier 10.15482/USDA.ADC/26527447.v1
Data Last Modified 2024-08-14
Public Access Level public
Data Update Frequency R/P1W
Bureau Code 005:18
Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
Schema Version https://project-open-data.cio.gov/v1.1/schema
Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
Harvest Object Id 5a746f9f-af5a-4517-916c-db62a3d344d9
Harvest Source Id d3fafa34-0cb9-48f1-ab1d-5b5fdc783806
Harvest Source Title USDA JSON
License https://creativecommons.org/licenses/by/4.0/
Program Code 005:040
Source Datajson Identifier True
Source Hash a0415fbe71e5c57e7d67828c9220a092adaa66699b8252d3ed774c45ef99cae4
Source Schema Version 1.1
Temporal 2023-10-12/2023-12-07

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