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Citation bot (talk | contribs) Added article-number. Removed parameters. Some additions/deletions were parameter name changes. | Use this bot. Report bugs. | #UCB_CommandLine |
Citation bot (talk | contribs) Added bibcode. | Use this bot. Report bugs. | Suggested by Abductive | Category:Cleanup tagged articles with a reason field from July 2025 | #UCB_Category 43/126 |
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====Geometry====
<ref name="Engh" /><ref name="Gelbin">{{cite journal |vauthors=Gelbin A, Schneider B, Clowney L, ((Hsieh S-H)), Olson WK, Berman HM |author6-link=Helen M. Berman |year=1996 |title=Geometric parameters in Nucleic Acids:Sugar and Phosphate Constituents |journal=Journal of the American Chemical Society |volume=118 |issue=3 |pages=519–529 |doi=10.1021/ja9528846 |bibcode=1996JAChS.118..519G }}</ref><ref>{{cite journal | vauthors = Schultze P, Feigon J | title = Chirality errors in nucleic acid structures | journal = Nature | volume = 387 | issue = 6634 | pages = 668 | date = June 1997 | pmid = 9192890 | doi = 10.1038/42632 | bibcode = 1997Natur.387..668S | s2cid = 4318780 | doi-access = free }}</ref>
====Conformation (dihedrals): protein & RNA====
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===Data Validation: Chemical Shifts, NOEs, RDCs===
;AVS: Assignment validation suite ([https://www.ncbi.nlm.nih.gov/pubmed/14872126 AVS]) checks the chemical shifts list in BioMagResBank (BMRB) format for problems.<ref name="pmid14872126">{{cite journal | vauthors = Moseley HN, Sahota G, Montelione GT | title = Assignment validation software suite for the evaluation and presentation of protein resonance assignment data | journal = Journal of Biomolecular NMR | volume = 28 | issue = 4 | pages = 341–55 | date = April 2004 | pmid = 14872126 | doi = 10.1023/B:JNMR.0000015420.44364.06 | s2cid = 14483199 }}</ref>
;PSVS: Protein Structure Validation Server at the NESG based on information retrieval statistics<ref name="HuangPowers2005">{{cite journal | vauthors = Huang YJ, Powers R, Montelione GT | title = Protein NMR recall, precision, and F-measure scores (RPF scores): structure quality assessment measures based on information retrieval statistics | journal = Journal of the American Chemical Society | volume = 127 | issue = 6 | pages = 1665–74 | date = February 2005 | pmid = 15701001 | doi = 10.1021/ja047109h | bibcode = 2005JAChS.127.1665H }}</ref>
;[[PROSESS]]: PROSESS (Protein Structure Evaluation Suite & Server) is a new web server that offers an assessment of protein structural models by NMR chemical shifts as well as NOEs, geometrical, and knowledge-based parameters.
;LACS:Linear analysis of chemical shifts is used for absolute referencing of chemical shift data.
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