List of alignment visualization software: Difference between revisions

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Revision as of 01:41, 22 August 2023 edit Charles Plessy (talk \| contribs) 30 edits Seaview is Free and runs on Linux, Mac and Windows ← Previous edit		Latest revision as of 14:09, 29 May 2025 edit undo 98.229.241.106 (talk) →Alignment viewers, editors
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Line 46: \| {{Official website\|www.red-bean.com/ale}} \|- \| AliView ~~2021~~2025 \| {{no}} \| {{yes\|MUSCLE integrated; other programs such as MAFFT can be defined}} Line 182: \|Command line \| {{Official website\|www.clustal.org}} \|- \| [[CodonCode Aligner]] \| {{no \| no, but can read, add & show structure annotations}} \| {{yes\|[[Clustal]], MUSCLE, various built-in algorithms}} \| {{yes\| Yes}} \| Multi- and pairwise alignments, assembly, sequence translation, editing, trimming, mutation detection, restriction analysis, cloning, primer design, dotplot, much more \| ABI, SCF, [[FASTA format\|FASTA]], FASTQ, [[Nexus file\|Nexus]]/PAUP or [[PHYLIP]], Sam, Bam, .dna, EMBL, GenBank, BLAST, GFF \| {{proprietary}}, [[Commercial software\|commercial]], Viewer is [[Freeware]] \|No \|Mac OS, Windows \| {{Official website\|www.codoncode.com/aligner}} \|- \| Cylindrical Alignment App