ModBase: Difference between revisions

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}}'''ModBase''' is a database of annotated [[Homology modeling|comparative protein structure]] models, containing models for more than 3.8 million unique protein sequences.<ref name="pmid21097780">{{cite journal |last=Pieper|first=Ursula |author2=Webb Benjamin M |author3=Barkan David T |author4=Schneidman-Duhovny Dina |author5=Schlessinger Avner |author6=Braberg Hannes |author7=Yang Zheng |author8=Meng Elaine C |author9=Pettersen Eric F |author10=Huang Conrad C |author11=Datta Ruchira S |author12=Sampathkumar Parthasarathy |author13=Madhusudhan Mallur S |author14=Sjölander Kimmen |author15=Ferrin Thomas E |author16=Burley Stephen K |author17=Sali Andrej |date=Jan 2011|title=ModBase, a database of annotated comparative protein structure models, and associated resources|journal = Nucleic Acids Res.|volume=39|issue=Database issue|pages=D465-74|publisher= |___location = England| issn = | pmid = 21097780|doi = 10.1093/nar/gkq1091| bibcode = | oclc =| id = | url = | pmc =3013688 | format = | accessdate = | laysummary = | laysource = | laydate = | quote = }}</ref> Models are created by the [[comparative modeling]] pipeline [[ModPipe]] which relies on the [[MODELLER]] program.

ModBase is developed in the laboratory of [[Andrej Sali]] at [[UCSF]]. ModBase models are also accessible through the [[Protein Model Portal]].

==See also==

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* http://salilab.org/modbase

[[Category:BiologicalProtein databases]]

[[Category:Protein methods]]

[[Category:Protein structure]]