Content deleted Content added
A new web-based tool named Thagomizer was created for biological researchers. I have added it to this page, under the heading "Biology." |
m The heading "Biology" was changed to "RNA Biology" since the heading "paleobiology" is already in use. Using the heading "Biology" would, therefore, seemingly cause the material discussion to be labeled with a far too broad a title. |
||
Line 27:
In a 2017 paper, the term [[thagomizer graph]] (and also the associated "thagomizer [[matroid]]") was introduced for the [[Multipartite graph|complete tripartite graph]] {{math|''K''<sub>1,1,''n''</sub>}}.<ref>{{cite journal|last1=Gedeon|first1=Katie|last2=Proudfoot|first2=Nicholas|last3=Young|first3=Benjamin|date=2017|title=Kazhdan-Lusztig polynomials of matroids: a survey of results and conjectures|url=https://www.emis.de/journals/SLC/wpapers/FPSAC2017/80%20Gedeon%20Proudfoot%20Young.pdf|journal=Séminaire Lotharingien de Combinatoire|volume=78B|page=80|arxiv=1611.07474}}</ref>
== Molecular Biology ==
In 2023, researchers at the University of California, San Francisco's Ansel Lab presented ''Thagomizer'', a modality for the interrogation of RNA-protein binding events in [[Cross-linking immunoprecipitation|CLIP-Seq]] (Cross-linking and immunoprecipitation) data.<ref>{{Cite journal |last=Zhu |first=Wandi S. |last2=Litterman |first2=Adam J. |last3=Sekhon |first3=Harshaan S. |last4=Kageyama |first4=Robin |last5=Arce |first5=Maya M. |last6=Taylor |first6=Kimberly E. |last7=Zhao |first7=Wenxue |last8=Criswell |first8=Lindsey A. |last9=Zaitlen |first9=Noah |last10=Erle |first10=David J. |last11=Ansel |first11=K. Mark |date=2023-12-07 |title=GCLiPP: global crosslinking and protein purification method for constructing high-resolution occupancy maps for RNA binding proteins |url=https://doi.org/10.1186/s13059-023-03125-2 |journal=Genome Biology |volume=24 |issue=1 |pages=281 |doi=10.1186/s13059-023-03125-2 |issn=1474-760X |pmc=PMC10701951 |pmid=38062486}}</ref><ref>{{Cite web |title=Thagomizer |url=https://thagomizer.ucsf.edu/ |access-date=2024-01-12 |website=thagomizer.ucsf.edu}}</ref>
| |||