HITS-CLIP: Difference between revisions

Revision as of 21:20, 31 October 2013

Revision as of 12:37, 3 December 2013

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== External links ==

* [http://starbase.sysu.edu.cn/ starBase database]: a database for exploring miRNA-mRNA, miRNA-[[ceRNAlncRNA]], miRNA-[[lncRNAsncRNA]], miRNA-[[circRNA]], miRNA-[[pseudogene]], andprotein-[[lncRNA]], '''[[protein-RNA]]''' interactions and [[ceRNA]] networks from '''HITS-CLIP''' ('''[[CLIP-Seq]]''', '''PAR-CLIP''', '''[[iCLIP]]''', '''CLASH''') data, and '''TargetScan, PicTar, RNA22, miRanda and PITA''' microRNA target sites.

* [http://www.clipz.unibas.ch/ clipz]: a pipeline to analyze short RNA reads from HITS-CLIP experiments.