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Several tools for single and multiple structural alignments are available on the web:
* MAMMOTH ('''Ma'''tching '''M'''olecular '''M'''odels '''O'''btained from '''T'''heory): http://ub.cbm.uam.es/mammoth/mult/
* CE ('''C'''ombinatorial '''E'''xtension of the optimum path): http://cl.sdsc.edu/ce.html
* DALI ('''D'''istance Matrix '''A'''lignment): http://www.ebi.ac.uk/dali/
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* SARF2 ('''S'''patial '''Ar'''rangement of Backbone '''F'''ragments): http://123d.ncifcrf.gov/sarf2.html
* SSAP ('''S'''equential '''S'''tructure '''A'''lignment '''P'''rogram): http://www.biochem.ucl.ac.uk/cgi-bin/cath/GetSsapRasmol.pl
== See also ==
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