Module:Infobox gene: Difference between revisions

Revision as of 12:49, 25 January 2017

Revision as of 06:57, 8 February 2017

Line 35:

local checkOrtholog = "" --flag used to see if mouse data avaliable

local mouse_propertyID = "P684" --actually ortholog property additional orthologs can exist

local protein_propertyID = "P688"

Line 92:

claims = entity.claims[mouse_propertyID]

end

local qualifierID = "P703" --found in taxon

if claims then

local mouse_tax = "Mus musculus"

if claims then

if (claims[1] and claims[1].mainsnak.snaktype == "value" and claims[1].mainsnak.datavalue.type == "wikibase-entityid") then

for k, v in pairs(claims) do
local mouse_itemID = "Q" .. claims[1]v.mainsnak.datavalue.value["numeric-id"]

mm_qid local = mouse_itemIDquals

if v.qualifiers then

entity_mouse = mw.wikibase.getEntity(mouse_itemID)

quals = v.qualifiers.P703

checkOrtholog = 1

end

if quals then

for qk, qv in pairs(quals) do

--get the taxon name in qualifier

local qual_obj_id = "Q"..qv.datavalue.value["numeric-id"]

mw.wikibase.label(qual_obj_id)

local qual_obj = mw.wikibase.label(qual_obj_id)

if string.match(qual_obj, mouse_tax) then --check if this is mouse or other

mm_qid = mouse_itemID

entity_mouse = mw.wikibase.getEntity(mouse_itemID)

checkOrtholog = 1

end

end

end

end

end --will return nothing if no claims are found

else