Sequence clustering: Difference between revisions

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m Sequence clustering algorithms and packages: Journal cites, added 2 PMCs using AWB (12156)
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|pages=1575–84
|pmid=11917018
|doi=10.1093/nar/30.7.1575 |pmc=101833}}</ref>
* BAG: a graph theoretic sequence clustering algorithm<ref>http://bio.informatics.indiana.edu/sunkim/BAG/</ref>
* JESAM:<ref>{{cite web|url=http://www.littlest.co.uk/software/bioinf/old_packages/jesam/jesam_paper.html|title=Bioinformatics Paper: JESAM: CORBA software components for EST alignments and clusters|work=littlest.co.uk}}</ref> Open source parallel scalable DNA alignment engine with optional clustering software component
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|pages=2482–2483
|pmid=20679333
|doi=10.1093/bioinformatics/btq435}}</ref>
|pmc=2944197}}</ref>
* Clusterer:<ref>{{cite web|url=http://bugaco.com/bioinf/clusterer/|title=Clusterer: extendable java application for sequence grouping and cluster analyses|work=bugaco.com}}</ref> extendable java application for sequence grouping and cluster analyses
* PATDB: a program for rapidly identifying perfect substrings