List of alignment visualization software: Difference between revisions

Revision as of 20:58, 28 October 2017

Revision as of 13:13, 31 October 2017

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| {{no}}

| {{no}}

| A multivalent browser for sequence alignment, phylogeny, and structure. Performs an interactive [httphttps://www.ncbi.nlm.nih.gov/pubmed/8609628 Evolutionary Trace] and other phylogeny inspired analysis.

| [[FASTA format|FASTA]], MSF, [[Clustal]], [[PHYLIP]], [[Newick format|Newick]], [[Protein Data Bank (file format)|PDB]]

| {{proprietary}}, [[Commercial software|commercial]], [[freeware]] for academic use

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| [[Nexus file|Nexus]], [[Clustal]], [[FASTA format|FASTA]], [[PHYLIP]], [[MEGA, Molecular Evolutionary Genetics Analysis|MEGA]], [[Stockholm format|Stockholm]], NBRF/[[Protein Information Resource|PIR]], GDE flat

| {{free}}, [[GNU General Public License|GPL]]

| {{Official website|github.com/4ment/seqotron}} [httphttps://www.ncbi.nlm.nih.gov/pubmed/26887850 publication]

|-

| Sequilab

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| FASTA, newick

| {{free}}, [[Apache License|Apache]] 2.0

| {{Official website|github.com/yeastrc/snipviz}}, [httphttps://www.ncbi.nlm.nih.gov/pubmed/?term=25056180 publication]

|-

| Strap