Revision as of 01:23, 19 May 2019 edit AManWithNoPlan (talk \| contribs) Extended confirmed users 100,078 edits Alter: doi-broken-date. Add: bibcode. \| You can use this tool yourself. Report bugs here. ← Previous edit		Revision as of 20:13, 18 August 2019 edit undo Citation bot (talk \| contribs) Bots 5,864,666 edits m Alter: doi-broken-date. Add: hdl. \| You can use this bot yourself. Report bugs here.\| Activated by User:AManWithNoPlan \| Category:Pages_with_DOIs_inactive_as_of_2019. Next edit →
Line 36: \|issue= 11\|pages=1026–1028 \|doi=10.1038/nbt.3988 \|pmid= 29035372\|hdl=11858/00-001M-0000-002E-1967-3 }}</ref> software suite for fast, sensitive sequence searching and clustering of large sequence sets * TribeMCL: a method for clustering proteins into related groups<ref>{{cite journal \|title=An efficient algorithm for large-scale detection of protein families. Line 56: * Skipredudant EMBOSS tool<ref>{{cite web\|url=http://bioweb2.pasteur.fr/docs/EMBOSS/skipredundant.html\|title=EMBOSS: skipredundant\|work=pasteur.fr}}</ref> to remove redundant sequences from a set * CLUSS Algorithm<ref>{{cite journal\|title=CLUSS Algorithm : Clustering non-alignable protein sequences\|journal=Prospectus.usherbrooke.ca\|volume=8\|pages=286\|doi=10.1186/1471-2105-8-286\|pmid=17683581\|pmc=1976428\|year = 2007\|last1 = Kelil\|first1 = Abdellali\|last2=Wang\|first2=Shengrui\|last3=Brzezinski\|first3=Ryszard\|last4=Fleury\|first4=Alain}}</ref> to identify groups of structurally, functionally, or evolutionarily related hard-to-align protein sequences. CLUSS webserver <ref name="prospectus.usherbrooke.ca">{{Cite web \| url=http://prospectus.usherbrooke.ca/CLUSS/ \| title=CLUSS Home Page}}</ref> * CLUSS2 Algorithm<ref>{{cite journal\|url=https://www.inderscienceonline.com/doi/abs/10.1504/IJCBDD.2008.02019\|title=CLUSS2 : Alignment-independent algorithm for clustering protein families with multiple biological functions\|issue=2\|pages=122–140\|journal=International Journal of Computational Biology and Drug Design\|volume=1\|doi=10.1504/IJCBDD.2008.02019\|date=January 2008\|last1=Kelil\|first1=Abdellali\|last2=Wang\|first2=Shengrui\|last3=Brzezinski\|first3=Ryszard\|doi-broken-date=2019-0508-1918}}</ref> for clustering families of hard-to-align protein sequences with multiple biological functions. CLUSS2 webserver <ref name="prospectus.usherbrooke.ca"/> <!-- Lets try the above (although both are wobbly) --> <!-- * [http://bio.cc/RSDB RSDB] broken link -->

Sequence clustering: Difference between revisions