Content deleted Content added
Clean up duplicate template arguments using findargdups |
Citation bot (talk | contribs) Alter: journal, pages. Add: page, issue, pmc, s2cid, pmid, bibcode, author pars. 1-1. Removed parameters. Formatted dashes. Some additions/deletions were actually parameter name changes. | You can use this bot yourself. Report bugs here. | Suggested by Headbomb | All pages linked from cached copy of Wikipedia:WikiProject_Academic_Journals/Journals_cited_by_Wikipedia/Sandbox | via #UCB_webform_linked 62/563 |
||
Line 14:
}}
The '''Brain Imaging Data Structure''' ('''BIDS''') is a standard for organizing, annotating, and describing data collected during [[neuroimaging]] experiments. It is based on a formalized file/folder structure and [[JSON]] based metadata files with [[controlled vocabulary]].<ref>{{cite journal |last1=Gorgolewski |first1=Krzysztof J. |last2=Auer |first2=Tibor |last3=Calhoun | first3=Vince D. |last4=Craddock| first4=R. Cameron |last5=Das |first5=Samir |last6=Duff |first6=Eugene P. |last7=Flandin |first7=Guillaume |last8=Ghosh |first8=Satrajit S. |last9=Glatard |first9=Tristan |last10=Halchenko |first10=Yaroslav O. | last11=Handwerker |first11=Daniel A. | last12=Hanke |first12=Michael |last13=Keator |first13=David |last14=Li |first14=Xiangrui |last15=Michael |first15=Zachary |last16=Maumet |first16=Camille |last17=Nichols |first17=B. Nolan |last18=Nichols |first18=Thomas E. |last19=Pellman |first19=John |last20=Poline |first20=Jean-Baptiste |last21=Rokem |first21=Ariel |last22=Schaefer |first22=Gunnar |last23=Sochat |first23=Vanessa |last24=Triplett |first24=William |last25=Turner |first25=Jessica A. |last26=Varoquaux |first26=Gaël |last27=Poldrack |first27=Russell A. |journal=Scientific Data|volume=3|pages=160044|doi=10.1038/sdata.2016.44 |title=The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments|display-authors=et al |pmid=27326542 |pmc=4978148|year=2016|bibcode=2016NatSD...360044G }}</ref>
This standard has been adopted by a multitude of labs around the world as well as databases such as [[OpenNeuro]], SchizConnect, Developing Human Connectome Project, and FCP-INDI, and is seeing uptake in an increasing number of studies.<ref>{{cite journal|last1=Poldrack |first1=Russell A. |last2=Congdon | first2=Eliza |last3=Triplett |first3=William |last4=Gorgolewski |first4=Krzysztof J. |last5=Karlsgodt |first5=Katherine H. |last6=Mumford |first6=Jeanette A. |last7=Sabb |first7=Fred W. |last8=Freimer |first8=Nelson B. |last9=London |first9=Edythe D. |last10=Cannon |first10=Tyrone D. |last11=Bilder |first11=Robert M. |journal=Scientific Data|volume=3|pages=160110|doi=10.1038/sdata.2016.110 |title=A phenome-wide examination of neural and cognitive function|year=2016|pmid=27922632 |bibcode=2016NatSD...360110P |s2cid=33368149 }}</ref><ref>{{cite journal|journal=Frontiers in
While originally specified for [[Magnetic resonance imaging|MRI]] data, BIDS has been extended to several other imaging modalities such as [[Magnetoencephalography|MEG]],<ref>{{cite journal |last1=Niso |first1=Guiomar |last2=Gorgolewski |first2=Krzysztof J. |last3=Bock |first3=Elizabeth |last4=Brooks |first4=Teon L. |last5=Flandin |first5=Guillaume |last6=Gramfort |first6=Alexandre |last7=Henson |first7=Richard N. |last8=Jas |first8=Mainak |last9=Litvak |first9=Vladimir |last10=T. Moreau |first10=Jeremy |last11=Oostenveld |first11=Robert |last12=Schoffelen |first12=Jan-Mathijs |last13=Tadel |first13=Francois |last14=Wexler |first14=Joseph |last15=Baillet |first15=Sylvain |title=MEG-BIDS, the brain imaging data structure extended to magnetoencephalography |journal=Scientific Data |date=19 June 2018 |volume=5 |pages=180110 |doi=10.1038/sdata.2018.110|pmid=29917016 |pmc=6007085 |bibcode=2018NatSD...580110N }}</ref> [[Electroencephalography|EEG]],<ref>{{Cite journal|
== History ==
| |||