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Citation bot (talk | contribs) Add: doi-access. | Use this bot. Report bugs. | Suggested by Headbomb | Linked from Wikipedia:WikiProject_Academic_Journals/Journals_cited_by_Wikipedia/Sandbox | #UCB_webform_linked 940/1250 |
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| {{yes}}, [[POSIX Threads]]
| {{free}}, [[GNU General Public License|GPL]]
|<ref name="HomerMerrimanNelson2009">{{cite journal|last1=Homer|first1=Nils|last2=Merriman|first2=Barry|last3=Nelson|first3=Stanley F.|title=BFAST: An Alignment Tool for Large Scale Genome Resequencing|journal=PLOS ONE|volume=4|issue=11|year=2009|pages=e7767|pmid=19907642|pmc=2770639|doi=10.1371/journal.pone.0007767|bibcode=2009PLoSO...4.7767H|doi-access=free}}</ref>
| 2009
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| {{yes}}
| {{proprietary}}, [[freeware]] for academic and noncommercial users registered to HIVE deployment instance
|<ref name="VSimonyan2014">{{cite journal|last1=Santana-Quintero|first1=Luis|last2=Dingerdissen|first2=Hayley|last3=Thierry-Mieg|first3=Jean|last4=Mazumder|first4=Raja|last5=Simonyan|first5=Vahan|title=HIVE-Hexagon: High-Performance, Parallelized Sequence Alignment for Next-Generation Sequencing Data Analysis|journal=PLOS ONE|year=2014|pages=1754–1760|doi=10.1371/journal.pone.0099033|pmid=24918764|volume=9|issue=6|pmc=4053384|bibcode=2014PLoSO...999033S|doi-access=free}}</ref>
| 2014
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| {{yes}}
| {{free}}, [[GNU General Public License|GPL]] 3
|<ref>{{Cite journal|last1=Abuín|first1=José M.|last2=Pichel|first2=Juan C.|last3=Pena|first3=Tomás F.|last4=Amigo|first4=Jorge|date=2016-05-16|title=SparkBWA: Speeding Up the Alignment of High-Throughput DNA Sequencing Data|journal=PLOS ONE|volume=11|issue=5|pages=e0155461|doi=10.1371/journal.pone.0155461|issn=1932-6203|pmid=27182962|pmc=4868289|bibcode=2016PLoSO..1155461A|doi-access=free}}</ref>
|2016
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| {{yes}}, [[OpenMP]]
| {{free}}
|<ref name="NoeGirdeaKucherov2010">{{cite journal|last1=Noe|first1=L.|last2=Girdea|first2=M.|last3=Kucherov|first3=G.|title=Designing efficient spaced seeds for SOLiD read mapping|journal=Advances in Bioinformatics|volume=2010|year=2010|page=708501|pmid=20936175|pmc=2945724|doi=10.1155/2010/708501|doi-access=free}}</ref>
|2010
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