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<ref name="hoksza">{{cite journal|vauthors=Hoksza D, Svozil D |year=2012|title= Efficient RNA pairwise structure comparison by SETTER method|journal=Bioinformatics|volume= 28|issue=14|pages=1858–1864|doi=10.1093/bioinformatics/bts301|pmid=22611129|url=https://zenodo.org/record/890287|doi-access=free}}</ref>
<ref name="holm">{{cite journal|vauthors=Holm L, Sander C |pmid=8662544|year=1996|title=Mapping the protein universe|volume=273|issue=5275|pages=595–603|journal=Science|doi=10.1126/science.273.5275.595|bibcode=1996Sci...273..595H |s2cid=7509134}}</ref>
<ref name="kolodny">{{cite journal|vauthors=Kolodny R, Linial N |year=2004|title= Approximate protein structural alignment in polynomial time |journal=PNAS|volume= 101|issue=33|pages= 12201–12206|doi=10.1073/pnas.0404383101|pmid=15304646|pmc=514457|doi-access=free}}</ref>
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<ref name="Maiti">{{cite journal|author4-link=David S. Wishart|vauthors=Maiti R, Van Domselaar GH, Zhang H, Wishart DS |year=2004|title= SuperPose: a simple server for sophisticated structural superposition|journal=Nucleic Acids Res|volume= 32|pages=W590–4|doi=10.1093/nar/gkh477|pmid=15215457|issue=Web Server issue|pmc=441615}}</ref>
<ref name="martin">{{cite journal|author=Martin ACR|year=1982|title= Rapid Comparison of Protein Structures|journal=Acta Crystallogr A|volume= 38|pages= 871–873|doi=10.1107/S0567739482001806|issue=6|bibcode=1982AcCrA..38..871M }}</ref>
<ref name="Mathews">{{cite journal|vauthors=Mathews DH, Turner DH |year=2006|title= Prediction of RNA secondary structure by free energy minimization|journal=Curr Opin Struct Biol|volume= 16|issue=3|pages=270–8|doi=10.1016/j.sbi.2006.05.010|pmid=16713706}}</ref>
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<ref name="prlic">{{cite journal|vauthors=Prlic A, Bliven S, Rose PW, Bluhm WF, Bizon C, Godzik A, Bourne PE |year=2010|title= Pre-calculated protein structure alignments at the RCSB PDB website |pmid=20937596|pages= 2983–2985|volume=26|issue=23|doi=10.1093/bioinformatics/btq572|pmc=3003546|journal=Bioinformatics}}</ref>
<ref name="skolnick">{{cite journal|vauthors=Zhang Y, Skolnick J |year=2005|title= The protein structure prediction problem could be solved using the current PDB library|journal= Proc Natl Acad Sci USA|pmid=15653774|doi=10.1073/pnas.0407152101 |volume=102|issue=4|pages=1029–34|pmc=545829|bibcode=2005PNAS..102.1029Z |doi-access=free}}</ref>
<ref name="taylor">{{cite journal|vauthors=Taylor WR, Flores TP, Orengo CA |year=1994|title= Multiple protein structure alignment|journal=Protein Sci|volume= 3|issue=10|pages=1858–70|doi=10.1002/pro.5560031025|pmid=7849601|pmc=2142613}}</ref>
<ref name="theobald">{{cite journal|vauthors=Theobald DL, Wuttke DS |year=2006|title= Empirical Bayes hierarchical models for regularizing maximum likelihood estimation in the matrix Gaussian Procrustes problem|journal=Proceedings of the National Academy of Sciences|volume= 103|pages=18521–18527|doi=10.1073/pnas.0508445103|issue=49|pmid=17130458|pmc=1664551|bibcode=2006PNAS..10318521T |doi-access=free}}</ref>
<ref name="theobald2">{{cite journal|vauthors=Theobald DL, Wuttke DS |year=2006|journal=Bioinformatics|volume= 22|pages=2171–2172|doi=10.1093/bioinformatics/btl332|title=THESEUS: Maximum likelihood superpositioning and analysis of macromolecular structures|issue=17|pmid=16777907|pmc=2584349}}</ref>
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