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|[[Python (programming language)|Python]]
|GPU
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|CellularPotts.jl
|Cellular Potts
|2D,3D
|https://github.com/RobertGregg/CellularPotts.jl
|
|not ready for usage
|[[Julia (programming language)|Julia]]
|
|-
|Chaste<ref>{{cite journal | vauthors = Pitt-Francis J, Bernabeu MO, Cooper J, Garny A, Momtahan L, Osborne J, Pathmanathan P, Rodriguez B, Whiteley JP, Gavaghan DJ | display-authors = 6 | title = Chaste: using agile programming techniques to develop computational biology software | journal = Philosophical Transactions. Series A, Mathematical, Physical, and Engineering Sciences | volume = 366 | issue = 1878 | pages = 3111–3136 | date = September 2008 | pmid = 18565813 | doi = 10.1016/j.cpc.2009.07.019 | url = http://eprints.maths.ox.ac.uk/846 | access-date = 2019-02-01 | author16-link = Sarah L. Waters | archive-url = https://web.archive.org/web/20151120234903/http://eprints.maths.ox.ac.uk/846/ | archive-date = 2015-11-20 }}</ref><ref>{{cite journal | vauthors = Mirams GR, Arthurs CJ, Bernabeu MO, Bordas R, Cooper J, Corrias A, Davit Y, Dunn SJ, Fletcher AG, Harvey DG, Marsh ME, Osborne JM, Pathmanathan P, Pitt-Francis J, Southern J, Zemzemi N, Gavaghan DJ | display-authors = 6 | title = Chaste: an open source C++ library for computational physiology and biology | journal = PLOS Computational Biology | volume = 9 | issue = 3 | pages = e1002970 | date = 14 March 2013 | pmid = 23516352 | pmc = 3597547 | doi = 10.1371/journal.pcbi.1002970 | bibcode = 2013PLSCB...9E2970M }}</ref>
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