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A new web-based tool named Thagomizer was created for biological researchers. I have added it to this page, under the heading "Biology." |
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In a 2017 paper, the term [[thagomizer graph]] (and also the associated "thagomizer [[matroid]]") was introduced for the [[Multipartite graph|complete tripartite graph]] {{math|''K''<sub>1,1,''n''</sub>}}.<ref>{{cite journal|last1=Gedeon|first1=Katie|last2=Proudfoot|first2=Nicholas|last3=Young|first3=Benjamin|date=2017|title=Kazhdan-Lusztig polynomials of matroids: a survey of results and conjectures|url=https://www.emis.de/journals/SLC/wpapers/FPSAC2017/80%20Gedeon%20Proudfoot%20Young.pdf|journal=Séminaire Lotharingien de Combinatoire|volume=78B|page=80|arxiv=1611.07474}}</ref>
== Biology ==
In 2023, researchers at the University of California, San Francisco's Ansel Lab presented ''Thagomizer'', a modality for the interrogation of RNA-protein binding events in [[Cross-linking immunoprecipitation|CLIP-Seq]] (Cross-linking and immunoprecipitation) data.<ref>{{Cite journal |last=Zhu |first=Wandi S. |last2=Litterman |first2=Adam J. |last3=Sekhon |first3=Harshaan S. |last4=Kageyama |first4=Robin |last5=Arce |first5=Maya M. |last6=Taylor |first6=Kimberly E. |last7=Zhao |first7=Wenxue |last8=Criswell |first8=Lindsey A. |last9=Zaitlen |first9=Noah |last10=Erle |first10=David J. |last11=Ansel |first11=K. Mark |date=2023-12-07 |title=GCLiPP: global crosslinking and protein purification method for constructing high-resolution occupancy maps for RNA binding proteins |url=https://doi.org/10.1186/s13059-023-03125-2 |journal=Genome Biology |volume=24 |issue=1 |pages=281 |doi=10.1186/s13059-023-03125-2 |issn=1474-760X |pmc=PMC10701951 |pmid=38062486}}</ref><ref>{{Cite web |title=Thagomizer |url=https://thagomizer.ucsf.edu/ |access-date=2024-01-12 |website=thagomizer.ucsf.edu}}</ref>
==See also==
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