Carbohydrate Structure Database: Difference between revisions

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== Overview ==
 
The main data stored in CSDB are [[carbohydrate]] structures of bacterial, fungal, and plant origin. Each structure is assigned to an organism and is provided with the link(s) to the corresponding scientific publication(s), in which it was described. Apart from structural data, CSDB also stores [[Nuclear Magnetic Resonance Spectroscopy|NMR]] spectra, information on methods used to decipher a particular structure, and some other data.<ref name="Merged_CSDB" /><ref>{{cite journal| author=Harvey D.J.| date=2015|journal=Mass Spectrometry Reviews |title=Analysis of carbohydrates and glycoconjugates by matrix-assisted laser desorption/ionization mass spectrometry: An update for 2011-2012|doi=10.1002/mas.21471|pmid=26270629|volume=36| issue=3|pages=255–422| url=https://ora.ox.ac.uk/objects/uuid:8c8d3748-8a59-4bde-96cf-a1788d258885}}</ref>
CSDB provides access to several carbohydrate-related research tools:
* Simulation of 1D and 2D [[NMR]] spectra of [[carbohydrates]] ([http://csdb.glycoscience.ru/database/index.html?help=nmr GODDESS: glycan-oriented database-driven empirical spectrum simulation]).<ref name="GODDESS">{{cite journal| author=Kapaev R.R.| author2=Egorova K.S.| author3=Toukach Ph.V.|date=2014|journal=Journal of Chemical Information and Modeling |volume=54|issue=9|pages=2594–2611 |title=Carbohydrate structure generalization scheme for database-driven simulation of experimental observables, such as NMR chemical shifts|doi = 10.1021/ci500267u|pmid=25020143}}</ref><ref name="GODDESS_1H">{{cite journal| author=Kapaev R.R.| author2=Toukach Ph.V.|date=2015|journal=Analytical Chemistry |volume=87|pages=7006–7010 |title=Improved carbohydrate structure generalization scheme for <sup>1</sup>H and <sup>13</sup>C NMR simulations| issue=14|doi=10.1021/acs.analchem.5b01413|pmid=26087011}}</ref><ref name="GODDESS_2D">{{cite journal| author=Kapaev R.R.| author2=Toukach Ph.V.|date=2016|journal=Journal of Chemical Information and Modeling |volume=56|pages=1100–1104 |title=Simulation of 2D NMR Spectra of Carbohydrates Using GODDESS Software| issue=6|doi=10.1021/acs.jcim.6b00083|pmid=27227420}}</ref>