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| Geneious Basic (freeware) Geneious Pro (commercial with student and academic discounts)
| [http://www.geneious.com link]
|-
| [[Integrated Genome Browser]] (IGB)
| No
| No
| No
| sequences and features from files, URLs, and arbitrary DAS and QuickLoad servers
| BAM, [[FASTA format|FASTA]], PSL
| [[Common Public License|CPL]]
| [http://igb.bioviz.org link]
|-
| Jalview 2
|