List of alignment visualization software: Difference between revisions

Revision as of 09:59, 25 August 2011

Revision as of 00:28, 25 September 2011

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| Freeware, registration requested

| [http://www.megasoftware.net/ link], [http://www.megasoftware.net/features.html table of features]

|-

| Multiseq

| No, but can display and align 3D structures

| ClustaLW, MaFFT, Stamp (Strutural)

| Percent identity, Clustal, MaFFT, Structural

| Scripting via [[Tcl]], mapping from sequence to 3D structure

| FASTA, PDB, ALN, PHYLYP, NEXUS

| Free, but plugin for program free only for noncommercial use

| [http://www.ks.uiuc.edu/Research/vmd/plugins/pluginlicense.html link]

|-

| MView