List of genetic algorithm applications: Difference between revisions

Revision as of 13:51, 13 May 2012

Revision as of 17:06, 4 June 2012

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* [[Bioinformatics]] [[multiple sequence alignment]].<ref name="Gondro">{{cite journal|author= Gondro C, Kinghorn BP | title = A simple genetic algorithm for multiple sequence alignment | journal = Genetics and Molecular Research | year = 2007 | volume = 6 | pages = 964–982 |issue= 4|pmid= 18058716 }}</ref>

* [[Bioinformatics]]: [[RNA]] structure prediction.<ref name="Batenburg">{{cite journal|author= van Batenburg FH, Gultyaev AP, Pleij CW | title = An APL-programmed genetic algorithm for the prediction of RNA secondary structure | journal = Journal of Theoretical Biology | year = 1995 | volume = 174 | pages = 269–280 | pmid = 7545258 | doi = 10.1006/jtbi.1995.0098|issue= 3 }}</ref>

* [[Bioinformatics]]: [[Multiple Sequence Alignment]].<ref name="Notredame">{{cite journal|author= Notredame C, Higgins DG| title = SAGA a Genetic Algorithm for Multiple Sequence Alignment | journal = Nucleic Acids Research | year = 1995 | volume = 24 | pages = 1515 | pmid = 8628686|issue= 8|pmc= 145823 | doi=10.1093/nar/24.8.1515}}</ref> SAGA is available on:.<ref>[http://www.tcoffee.org/homepage.html Cedric Notredame Home Page<!-- Bot generated title -->]</ref>

* [[Bioinformatics]]: [[Motif Discovery]].<ref> [http://www.springerlink.com/content/0374r4h611ml8634/ Ka-Chun Wong*, Chengbin Peng, Man-Hon Wong, Kwong-Sak Leung: Generalizing and learning protein-DNA binding sequence representations by an evolutionary algorithm. Soft Computing, 15:1631-1642, 2011.] </ref>

* Biology and computational chemistry ([http://www.math.u-bordeaux1.fr/~delmoral/simu-biology.html] links to particle methods in biology and computational chemistry and [http://www.math.u-bordeaux1.fr/~delmoral/ihp.ps] an article on genetic particle models)

* Building [[phylogenetic tree]]s.<ref name="Hill">{{cite journal|author= Hill T, Lundgren A, Fredriksson R, Schiöth HB | title = Genetic algorithm for large-scale maximum parsimony phylogenetic analysis of proteins | journal = Biochimica et Biophysica Acta | year = 2005 | volume = 1725 | pages = 19–29 | pmid = 15990235|issue= 1|doi= 10.1016/j.bbagen.2005.04.027 }}</ref>

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* Molecular structure optimization (chemistry).

* [[Multidimensional systems]]

* Multimodal Optimization <ref>[http://www.springerlink.com/content/jn23t10366778017/ Ka-Chun Wong, Kwong-Sak Leung, Man Hon Wong: Effect of Spatial Locality on an Evolutionary Algorithm for Multimodal Optimization. EvoApplications (1) 2010: 481-490]</ref><ref>[http://portal.acm.org/citation.cfm?id=1570027 Ka-Chun Wong, Kwong-Sak Leung, Man Hon Wong: An evolutionary algorithm with species-specific explosion for multimodal optimization. GECCO 2009: 923-930]</ref><ref>[http://www.sciencedirect.com/science/article/pii/S0020025511006657 Ka-Chun Wong, Chun-Ho Wu, Ricky K.P. Mok, Chengbin Peng, Zhaolei Zhang, Evolutionary multimodal optimization using the principle of locality, Information Sciences, Volume 194, 1 July 2012, Pages 138-170, ISSN 0020-0255, 10.1016/j.ins.2011.12.016]</ref>

* Multiple criteria production scheduling.<ref name="Bagchi">{{cite journal|author= Bagchi Tapan P | title = Multiobjective Scheduling by Genetic Algorithms | year = 1999 | [[Kluwer Academic]]. ISBN 0-7923-8561-6 | work = Multiobjective Scheduling by Genetic Algorithms}}</ref>

* Multiple population [[topologies]] and interchange [[methodologies]].