List of alignment visualization software: Difference between revisions

Revision as of 03:36, 9 June 2012

Revision as of 22:39, 18 September 2012

Line 223:

| local Muscle/Clustalw

| Parcimony, distance methods, PhyML

| Dot-plot, [[vim (text editor)|vim]]-like editing keys

| [[Nexus file|Nexus]], [[MSF format|MSF]], [[Clustal]], [[FASTA format|FASTA]], [[PHYLIP format|PHYLIP]], [[MASE format|MASE]]

|

Line 251:

| [[Neighbor-joining]]

| Dot-plot, Structure-neighbors, 3D-superposition, Blast-search, Mutation/SNP analysis, Sequence features, [[Biojava]]-interface

| [[MSF format|MSF]], [[Stockholm format|Stockholm]], [[Clustal]]w, [[Nexus file|Nexus]], [[FASTA]], [[Protein Data Bank (file format)|PDB]], Embl, [[GenBank]], [[hssp]], [[Pfam]]

| [[GPL]]

| [http://3d-alignment.eu/ link]