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==Taxonomy==
The Java mouse-deer’s common scientific name is ''Tragulus javanicus'', although other classification names for it exist, including ''Tragulus javanica'', ''Cervus javanicus'', and ''Tragulus fuscatus''.<ref name=meijaard/> <ref name=ARKive4>Javan mouse-deer (Tragulus javanicus). (2013). ARKive - Discover the world's most endangered species. Retrieved from http://www.arkive.org/javan-mouse-deer/tragulus-javanicus</ref> <ref>Facts about Lesser Mouse Deer (Tragulus javanicus) - Encyclopedia of Life. (n.d.). Encyclopedia of Life - Animals - Plants - Pictures & Information. Retrieved from http://eol.org/pages/328339/names/synonyms</ref> The Java mouse-deer is also known by many common names, including Javan chevrotain, Javan mousdeer, or Java Mousedeer.<ref name=eof5>Facts about Lesser Mouse Deer (Tragulus javanicus) - Encyclopedia of Life. (n.d.). Encyclopedia of Life - Animals - Plants - Pictures & Information. Retrieved from http://eol.org/pages/328339/</ref> The taxonomic status of the Java mouse-deer is questionable, but recent craniometric analyses have begun to shed light on the taxonomic discrepancies. Previously, the Java mouse-deer, ''Tragulus javanicus'', was commonly thought to represent the wider class of large [[chevrotain]]s, but it was found that these, unlike the Java mouse-deer, do not likely reside on [[Java]]. Three species groups of ''Tragulus'' have been identified based on craniometric skull analyses and coat coloration patterns. These three species groups are ''Tragulus javanicus'', ''[[Tragulus napu]]'', and ''[[Tragulus versicolor]]''. Based upon these craniometric analyses, ''Tragulus javanicus'' is further separated based on the organisms’ known geographic locations: ''[[Tragulus williamsoni]]'' (found in northern Thailand and possibly southern China), ''[[Tragulus kanchil]]'' (found in Borneo, Sumatra, the Thai–Malay Peninsula, islands within the Greater Sunda region, and continental Southeast Asia), and ''Tragulus javanicus'' (found in Java).<ref name=meijaard6>Meijaard, E., & Groves, C. P. (2004). A Taxonomic Revision Of The Tragulus Mouse-deer (Artiodactyla). Zoological Journal of the Linnean Society, 140(1), 63-102. Retrieved from http://onlinelibrary.wiley.com/doi/10.1111/j.1096-3642.2004.00091.x/abstract</ref> Thus, because of its uniqueness to the island of Java, the Java mouse-deer is now considered a distinct species, although this fact has not significantly affected its current classification.<ref name=redorbit7>Java Mouse Deer, ''Tragulus javanicus'' - Mammals Reference Library - redOrbit. (n.d.). redOrbit - Science, Space, Technology, Health News and Information. Retrieved from http://www.redorbit.com/education/reference_library/science_1/mammalia/1112721404/java-mouse-deer-tragulus-javanicus/</ref>
==Appearance and biology==
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