Glycogen debranching enzyme: Difference between revisions

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{{Reflist | colwidth = 35em | refs =

<ref name="Song">{{cite journal | author vauthors= Song HN, Jung TY, Park JT, Park BC, Myung PK, Boos W, Woo EJ, Park KH | title = Structural rationale for the short branched substrate specificity of the glycogen debranching enzyme GlgX | journal = Proteins | volume = 78 | issue = 8 | pages = 1847–55 |date=June 2010 | pmid = 20187119 | doi = 10.1002/prot.22697 | url = | issn = }}</ref>

<ref name="Bao">{{cite journal | author vauthors= Bao Y, Dawson TL, Chen YT | title = Human glycogen debranching enzyme gene (AGL): complete structural organization and characterization of the 5' flanking region | journal = Genomics | volume = 38 | issue = 2 | pages = 155–65 |date=December 1996 | pmid = 8954797 | doi = 10.1006/geno.1996.0611| url = | issn = }}</ref>

<ref name="Berg">{{cite book | author author1= Stryer, Lubert; |author2=Berg, Jeremy Mark; |author3=Tymoczko, John L. | authorlink = | others = | title = Biochemistry | edition = 6th | language = | publisher = W.H. Freeman | ___location = San Francisco | year = 2007 | origyear = | pages = | quote = | isbn = 0-7167-8724-5 | oclc = | doi = | url = | accessdate = }}</ref>

<ref name="Dauvillée">{{cite journal | author vauthors= Dauvillée D, Kinderf IS, Li Z, Kosar-Hashemi B, Samuel MS, Rampling L, Ball S, Morell MK | title = Role of the Escherichia coli glgX gene in glycogen metabolism | journal = J. Bacteriol. | volume = 187 | issue = 4 | pages = 1465–73 |date=February 2005 | pmid = 15687211 | pmc = 545640 | doi = 10.1128/JB.187.4.1465-1473.2005 | url = | issn = }}</ref>

<ref name="Nakayama">{{cite journal | author vauthors= Nakayama A, Yamamoto K, Tabata S | title = Identification of the catalytic residues of bifunctional glycogen debranching enzyme | journal = J. Biol. Chem. | volume = 276 | issue = 31 | pages = 28824–8 |date=August 2001 | pmid = 11375985 | doi = 10.1074/jbc.M102192200 | url = | issn = }}</ref>

<ref name="Chen">{{cite journal | author vauthors= Chen YT, He JK, Ding JH, Brown BI | title = Glycogen debranching enzyme: purification, antibody characterization, and immunoblot analyses of type III glycogen storage disease | journal = Am. J. Hum. Genet. | volume = 41 | issue = 6 | pages = 1002–15 |date=December 1987 | pmid = 2961257 | pmc = 1684360 | doi = | url = | issn = }}</ref>

<ref name="UniProt P35573">{{cite web | url = http://www.uniprot.org/uniprot/P35573 | title = Glycogen debranching enzyme - Homo sapiens (Human) | authorlink = | date = | format = | work = | publisher = UniProt | pages = | language = | archiveurl = | archivedate = | quote = | accessdate = }}</ref>

<ref name="Gillard_80">{{cite journal | author vauthors= Gillard BK, White RC, Zingaro RA, Nelson TE | title = Amylo-1,6-glucosidase/4-alpha-glucanotransferase. Reaction of rabbit muscle debranching enzyme with an active site-directed irreversible inhibitor, 1-S-dimethylarsino-1-thio-beta-D-glucopyranoside | journal = J. Biol. Chem. | volume = 255 | issue = 18 | pages = 8451–7 |date=September 1980 | pmid = 6447697 | doi = | url = | issn = }}</ref>

<ref name="Gillard">{{cite journal |vauthors=Gillard BK, Nelson TE | title = Amylo-1,6-glucosidase/4-alpha-glucanotransferase: use of reversible substrate model inhibitors to study the binding and active sites of rabbit muscle debranching enzyme | journal = Biochemistry | volume = 16 | issue = 18 | pages = 3978–87 |date=September 1977 | pmid = 269742 | doi = 10.1021/bi00637a007 }}</ref>

<ref name="GillardWoo">{{cite journal |vauthors=Woo authorEJ, =Lee GillardS, BKCha H, NelsonPark TEJT, |Yoon titleSM, =Song Amylo-1HN,6-glucosidase/4-alpha-glucanotransferase: usePark ofKH reversible| substratetitle model= inhibitorsStructural toinsight studyinto the binding andbifunctional active sitesmechanism of rabbit musclethe glycogen-debranching enzyme TreX from the archaeon Sulfolobus solfataricus | journal = BiochemistryJ. Biol. Chem. | volume = 16283 | issue = 1842 | pages = 3978–8728641–8 |date=SeptemberOctober 19772008 | pmid = 26974218703518 | pmc = 2661413 | doi = 10.10211074/bi00637a007jbc.M802560200 | url = | issn = }}</ref>

<ref name="WooUniProt A8QX06">{{cite journalweb | authorurl = Woo EJ, Lee S, Cha H, Park JT, Yoon SM, Song HN, Park KHhttp://www.uniprot.org/uniprot/A8QX06 | title = Structural insight into the bifunctional mechanism of theTreX glycogen-debranching enzymeActinoplanes TreXsp. fromSN223/29 the| archaeondate Sulfolobus solfataricus= | journalformat = J. Biol. Chem. | volumework = 283 | issuepublisher = 42UniProt | pages = 28641–8 |date=October 2008 | pmidlanguage = 18703518 | pmcarchiveurl = 2661413 | doiarchivedate = 10.1074/jbc.M802560200 | urlquote = | issnaccessdate = }}</ref>

<ref name="UniProt A8QX06A7ZSW4">{{cite web | url = http://www.uniprot.org/uniprot/A8QX06A7ZSW4 | title = TreXGlycogen debranching enzyme - ActinoplanesEscherichia sp.coli SN223/29O139:H28 |(strain authorlinkE24377A =/ ETEC) | date = | format = | work = | publisher = UniProt | pages = | language = | archiveurl = | archivedate = | quote = | accessdate = }}</ref>

<ref name="UniProt A7ZSW4P15977">{{cite web | url = http://www.uniprot.org/uniprot/A7ZSW4P15977 | title = Glycogen debranching enzyme4-alpha-glucanotransferase - Escherichia coli O139:H28 (strain E24377A / ETECK12) | authorlink = | date = | format = | work = | publisher = UniProt | pages = | language = | archiveurl = | archivedate = | quote = | accessdate = }}</ref>

<ref name="Park">{{cite journal |vauthors=Park JT, Park HS, Kang HK, Hong JS, Cha H, Woo EJ, Kim JW, Kim MJ, Boos W, Lee S, Park KH | title = Oligomeric and functional properties of a debranching enzyme (TreX) from the archaeon Sulfobus solfataricus P2. | journal = Biocatalysis and Biotransformation | year = 2008 | volume = 26 | pages = 76–85 | doi = 10.1080/10242420701806652 }}</ref>

<ref name="UniProt P15977">{{cite web | url = http://www.uniprot.org/uniprot/P15977 | title = 4-alpha-glucanotransferase - Escherichia coli (strain K12) | authorlink = | date = | format = | work = | publisher = | pages = | language = | archiveurl = | archivedate = | quote = | accessdate = }}</ref>

<ref name="ParkTalente">{{cite journal | author vauthors=Talente GM, ParkColeman JTRA, ParkAlter HSC, KangBaker HKL, HongBrown JSBI, ChaCannon HRA, WooChen EJYT, KimCrigler JWJF, KimFerreira MJP, BoosHaworth WJC, LeeHerman SGE, ParkIssenman KHRM, |Keating titleJP, =Linde OligomericR, andRoe functionalTF, propertiesSenior ofB, aWolfsdorf debranchingJI enzyme| (TreX)title from= theGlycogen archaeonstorage Sulfobusdisease solfataricusin P2.adults | journal = BiocatalysisAnn. andIntern. BiotransformationMed. | yearvolume = 2008120 | volumeissue = 263 | pages = 76–85218–26 |date=February 1994 | pmid = 8273986 | doi = 10.10807326/102424207018066520003-4819-120-3-199402010-00008| url = | issn = }}</ref>

<ref name="Talente">{{cite journal | author = Talente GM, Coleman RA, Alter C, Baker L, Brown BI, Cannon RA, Chen YT, Crigler JF, Ferreira P, Haworth JC, Herman GE, Issenman RM, Keating JP, Linde R, Roe TF, Senior B, Wolfsdorf JI | title = Glycogen storage disease in adults | journal = Ann. Intern. Med. | volume = 120 | issue = 3 | pages = 218–26 |date=February 1994 | pmid = 8273986 | doi = 10.7326/0003-4819-120-3-199402010-00008| url = | issn = }}</ref>

<ref name="Monga">{{cite book | author = Satdarshan P. S. Monga | title = Molecular Pathology of Liver Diseases (Molecular Pathology Library) | publisher = Springer | ___location = Berlin | year = 2010 | pages = | isbn = 1-4419-7106-8 }}</ref>

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<ref name="Hondoh">{{cite journal |vauthors=Hondoh H, Saburi W, Mori H, etal | title = Substrate recognition mechanism of alpha-1,6-glucosidic linkage hydrolyzing enzyme, dextran glucosidase from Streptococcus mutans | journal = J. Mol. Biol. | volume = 378 | issue = 4 | pages = 913–22 |date=May 2008 | pmid = 18395742 | doi = 10.1016/j.jmb.2008.03.016 }}</ref>

<ref name="MCCarter">{{cite journal | author vauthors= McCarter JD, Withers SG | title = Mechanisms of enzymatic glycoside hydrolysis | journal = Curr. Opin. Struct. Biol. | volume = 4 | issue = 6 | pages = 885–92 |date=December 1994 | pmid = 7712292 | doi = 10.1016/0959-440X(94)90271-2| url = }}</ref>

<ref name="Yamamoto">{{cite journal | author vauthors= Yamamoto E, Makino Y, Omichi K | title = Active site mapping of amylo-alpha-1,6-glucosidase in porcine liver glycogen debranching enzyme using fluorogenic 6-O-alpha-glucosyl-maltooligosaccharides | journal = J. Biochem. | volume = 141 | issue = 5 | pages = 627–34 |date=May 2007 | pmid = 17317688 | doi = 10.1093/jb/mvm065 }}</ref>

<ref name="Hers">{{cite journal | author vauthors= Hers HG, Verhue W, Van hoof F | title = The determination of amylo-1,6-glucosidase | journal = Eur. J. Biochem. | volume = 2 | issue = 3 | pages = 257–64 |date=October 1967 | pmid = 6078537 | doi = 10.1111/j.1432-1033.1967.tb00133.x }}</ref>

<ref name="Ding">{{cite journal | author vauthors= Ding JH, de Barsy T, Brown BI, Coleman RA, Chen YT | title = Immunoblot analyses of glycogen debranching enzyme in different subtypes of glycogen storage disease type III | journal = J. Pediatr. | volume = 116 | issue = 1 | pages = 95–100 |date=January 1990 | pmid = 2295969 | doi = 10.1016/S0022-3476(05)81652-X }}</ref>

<ref name="Molecule">{{cite journal | author = Chiba S | title = Molecular mechanism in alpha-glucosidase and glucoamylase | journal = Biosci. Biotechnol. Biochem. | volume = 61 | issue = 8 | pages = 1233–9 |date=August 1997 | pmid = 9301101 | doi = 10.1271/bbb.61.1233| url = }}</ref>

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<ref name="Gene">{{cite web | url = http://ghr.nlm.nih.gov/gene/AGL | title = Genes (Genetic Home Reference a service of U.S. National Library of Medicine. | accessdate = February 29, 2012 }}</ref>

<ref name="Shen">{{cite journal | author vauthors= Shen J, Bao Y, Liu HM, Lee P, Leonard JV, Chen YT | title = Mutations in exon 3 of the glycogen debranching enzyme gene are associated with glycogen storage disease type III that is differentially expressed in liver and muscle | journal = J. Clin. Invest. | volume = 98 | issue = 2 | pages = 352–7 |date=July 1996 | pmid = 8755644 | pmc = 507437 | doi = 10.1172/JCI118799 }}</ref>

<ref name="Kishnan">{{cite journal |vauthors=Kishnani PS, Austin SL, Arn P, etal | title = Glycogen storage disease type III diagnosis and management guidelines | journal = Genet. Med. | volume = 12 | issue = 7 | pages = 446–63 |date=July 2010 | pmid = 20631546 | doi = 10.1097/GIM.0b013e3181e655b6 }}</ref>