Dot plot (bioinformatics): Difference between revisions

Revision as of 18:57, 8 November 2017

Revision as of 22:44, 11 April 2018

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* [http://www.bioinformatics.nl/cgi-bin/emboss/dotmatcher dotmatcher] - Web tool to generate dot plots.

* [http://sonnhammer.sbc.su.se/Dotter.html Dotter] - Stand alone program to generate dot plots.

* [http://virology.uvic.ca/virology-ca-tools/jdotter/ JDotter] - Java version of Dotter.

* [http://www.ac-nice.fr/svt/productions/html5/dotplot/index.htm?arn=true Dotplot], easy (educational) HTML5 tool to generate dot plots from RNA sequences.

* [https://www.bx.psu.edu/~rsharris/lastz/ lastz] and [http://globin.bx.psu.edu/dist/laj/ laj], programs to prepare and visualize genomic alignments.

* [https://github.com/molbio-dresden/flexidot Flexidot], customizable and ambiguity-aware dotplot suite for visual sequence analyses implemented in Python.

[[Category:Statistical charts and diagrams]]