Sequence clustering: Difference between revisions

Revision as of 12:43, 11 May 2018

Revision as of 19:38, 30 June 2018

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* [[UCLUST]] in USEARCH<ref name=usearch/>

* CD-HIT<ref name=cdhit/>

* Linclust: clustering protein sequences in linear time<ref>{{Cite biorxivjournal|last=Steinegger|first=Martin|last2=Soeding|first2=Johannes|date=20172018-0506-2529|title=Linclust:Clustering clustering billions ofhuge protein sequencessequence persets dayin onlinear atime|journal= singleNature serverCommunications|biorxivdoi=10403410.1038/s41467-018-04964-5}}</ref>

* nrdb90.pl<ref name=rdb90>{{cite journal|pmid=9682055

|journal=Bioinformatics