Microarray analysis techniques: Difference between revisions

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====Response formats====
'''Types''':<ref name="R1"/>
:*'''Quantitative''' &mdash; real-valued (such as heart rate)
:*'''One class''' &mdash; tests whether the mean gene expression differs from zero
:*'''Two class''' &mdash; two sets of measurements
::**'''Unpaired''' &mdash; measurement units are different in the two groups; e.g. control and treatment groups with samples from different patients
::**'''Paired''' &mdash; same experimental units are measured in the two groups; e.g. samples before and after treatment from the same patients
:*'''Multiclass''' &mdash; more than two groups with each containing different experimental units; generalization of two class unpaired type
:*'''Survival''' &mdash; data of a time until an event (for example death or relapse)
:*'''Time course''' &mdash; each experimental units is measured at more than one time point; experimental units fall into a one or two class design
:*'''Pattern discovery''' &mdash; no explicit response parameter is specified; the user specifies eigengene (principal component) of the expression data and treats it as a quantitative response
 
===Algorithm===