BioCompute Object: Difference between revisions

Revision as of 20:16, 29 September 2019

Revision as of 22:39, 21 October 2019

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== Format ==

The BioCompute Object is in [[JSON|json]] format and, at a minimum, contains all the software versions and parameters necessary to evaluate or verify a computational pipeline. It may also contain input data as files or links, reference genomes, or executable Docker components. A BioCompute Object can be integrated with [[FHIR|HL7 FHIR]] as a Provenance Resource<ref>{{Cite web|url=https://www.hl7.org/fhir/provenance-example-biocompute-object.html|title=Provenance-example-biocompute-object|last=|first=|date=|website=HL7 FHIR Release 3 (STU)|archive-url=|archive-date=|dead-url=|access-date=}}</ref> or [[Common Workflow Language]] as a [[Research Object]].<ref>{{Citation|last=Soiland-Reyes|first=Stian|title=hive-cwl-examples: Example BioCompute as Research Object with CWL|date=2016-12-19|url=https://github.com/stain/hive-cwl-examples|accessdate=2017-12-21}}</ref>

== BCO Consortium ==