BioCompute Object: Difference between revisions

Revision as of 20:50, 6 July 2020

Revision as of 13:07, 21 July 2020

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== Implementations ==

The first mainstream software package that is compatible with the BioCompute specification is [https://galaxy.aws.biochemistry.gwu.edu/ Galaxy]. There are also several internally developed [[Open-source software|open source]] software packages and web applications that implement the BioCompute specification. For example, the simple R package biocompute<ref name="biocompute-r">{{cite web|url=https://cran.r-project.org/package=biocompute|title=CRAN - Package biocompute|publisher=cran.r-project.org|accessdate=2019-11-28}}</ref> can create, validate, and export BioCompute Objects. The [https://github.com/biocompute-objects/bco_editor BioCompute Editor] is a web application that can theoretically create and edit BioCompute Objects based on the BioCompute schema, however the project is not live in any available instance as of May 20, 2020. The [https://github.com/sbg/gcs Genomics Compliance Suite] is a Shiny app that offerscan similarautomatically featuresbuild toa [[RegularBCO expression|regularand expressions]]includes found in all moderna textworkflow editorsvisualization.

== References ==