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<ref name="Torarinsson">{{cite journal|vauthors=Torarinsson E, Sawera M, Havgaard JH, Fredholm M, Gorodkin J |year=2006|title= Thousands of corresponding human and mouse genomic regions unalignable in primary sequence contain common RNA structure|journal=Genome Res|volume= 16|issue=7|pages=885–9|doi=10.1101/gr.5226606|pmid=16751343|pmc=1484455}}</ref>
<ref name="wang">{{cite journal |last1=Wang |first1=Lusheng |last2=Jiang |first2=Tao |title=On the complexity of multiple sequence alignment. |journal=Journal of Computational Biology |date=1994 |volume=1 |issue=4 |pages=337–48 |doi=10.1089/cmb.1994.1.337 |pmid=8790475 |name-list-
<ref name="zemla">{{cite journal|author=Zemla A. |year=2003|title= LGA — A Method for Finding 3-D Similarities in Protein Structures|journal=Nucleic Acids Research|volume= 31|issue=13|pages=3370–3374|doi=10.1093/nar/gkg571|pmid=12824330|pmc=168977}}</ref>
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