Datasets
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Data from: Genomic regions associated with Mycoplasma ovipneumoniae presence in nasal secretions of domestic sheep
Genotypes of significant SNPs in all breed and individual breed analysis with detected Mycoplasma ovipneumoniae DNA copy number and log10 M. ovipneumoniae DNA copy number. SNP... -
Data from: Soil hydrological attributes of an integrated crop-livestock agroecosystem: Increased adaptation through resistance to soil change
Integrated crop-livestock systems can have positive agronomic and environmental benefits compared to specialized, single-enterprise production systems. However, concerns exist... -
Evaluating accuracy of DNA pool construction based on white blood cell counts
Pooling individual samples prior to DNA extraction can mitigate the cost of DNA extraction and genotyping; however, these methods need to accurately generate equal... -
Data from: Quantifying wildfire risk to the built environment in rangelands of the US Interior West
OverviewFire increasingly conflicts with the built environment. The Wildland-Urban Interface (WUI) describes areas where vegetation near the built environment increases wildfire... -
Data from: Crop Sequence and Nitrogen Fertilization Effects on Soil Properties in the Western Corn Belt
Understanding long-term management effects on soil properties is necessary to determine the sustainability of cropping systems. Documentation of soil property responses to corn-... -
Initial set of gene ontology (GO) terms for the D v virgifera GCF_003013835.1 RefSeq protein models
Gene ontologies generated using GOanna with a standard pipeline (https://agbase-docs.readthedocs.io/en/latest/goanna/using_goanna_cmd.html ; default settings) with queries... -
Data from: Evaluating plant biodiversity measurements and exotic species detection in National Resources Inventory Sampling protocols using examples from the Northern Great Plains of the USA
Plant biodiversity data and associated soils, ecological site, and livestock management data that were collected at the USDA-ARS Northern Great Plains Research Laboratory in... -
Data from: Reference transcriptomics of porcine peripheral immune cells created through bulk and single-cell RNA sequencing
This dataset contains files reconstructing single-cell data presented in 'Reference transcriptomics of porcine peripheral immune cells created through bulk and single-cell RNA... -
Landscape Data Commons
The Landscape Data Commons is an inter-agency monitoring data repository and portal, led by the USDA-ARS at the Jornada Experimental Range, that connects standardized monitoring... -
Data from: Acceptance of fire ant baits by nontarget ants in Florida and California
Invasive red imported fire ant, Solenopsis invicta, infestations can be cleared from areas with baits, but these areas are often reinfested. To facilitate biotic resistance... -
Data from: Multilocus microsatellite analysis of 'Candidatus Liberibacter asiaticus' associated with citrus Huanglongbing worldwide
Huanglongbing (HLB) is one of the most destructive citrus diseases in the world. The disease is associated with the presence of a fastidious, phloem-limited α- proteobacterium,... -
Data from: Phased Genotyping-by-Sequencing Enhances Analysis of Genetic Diversity and Reveals Divergent Copy Number Variants in Maize
High-throughput sequencing (HTS) of reduced representation genomic libraries has ushered in an era of genotyping-by-sequencing (GBS), where genome-wide genotype data can be... -
Data from: A Community Resource for Exploring and Utilizing Genetic Diversity in the USDA Pea Single Plant Plus Collection
Included in this dataset are SNP and fasta data for the Pea Single Plant Plus Collection (PSPPC) and the PSPPC augmented with 25 P. fulvum accessions. These 6 datasets can be... -
The Porcine Translational Research Database
The data in the Porcine Translational Research Database is supported by >5800 references, and contains 65 data fields for each entry, including >9700 full length (5′ and... -
<b>Data from: Cover crop interseeding effects on aboveground biomass and corn grain yield in western North Dakota</b>
Cover crops can provide many benefits, but the short growing season and variable weather in the northern Great Plains makes it difficult to include them in rainfed cropping... -
USDA-ARS Colorado Maize Water Productivity Dataset 2008-2011
The USDA-Agricultural Research Service carried out a water productivity field trial for irrigated maize (Zea mays L.) at the Limited Irrigation Research Farm (LIRF) facility in... -
Data from: Depth Matters: Soil pH and Dilution Effects in the Northern Great Plains
Near-surface soil acidification is becoming prevalent in dryland cropping systems throughout the northern Great Plains. To ensure management recommendations are optimized for... -
Data from: Development of a versatile resource from 1500 diverse genomes for post-genomics research
This data set contains 32 million annotated SNPs having an average SNP density of 30 SNPs per kb and 12 non-synonymous SNPs per gene model. These SNPs were identified from a... -
Divergence in host specificity and genetics among populations of Aphelinus certus
These are data on variation in host specificity and genetics among 16 populations of an aphid parasitoid, Aphelinus certus, 15 from Asia and one from North America. Host range... -
Data and code from: Establishment of southern highbush blueberry cultivars and suppression of Phytophthora root rot using cover crop and soil amendment treatments
This dataset contains all data and R statistical software code needed to reproduce the analyses presented in the paper:Smith, B.J., Stafne, E.T. & Read, Q.D. (2025)....