User:Juan Villada/Books/INTRODUCTION TO BIOINFORMATICS


INTRODUCTION TO BIOINFORMATICS TOOLS

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Juan Villada Arteaga - Microbiologia Agricola - UFV - 2014

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Introduction
Omics
Bioinformatics
Computational biology
Biological database
National Center for Biotechnology Information
European Bioinformatics Institute
Sequence Aligment
Sequence alignment
List of sequence alignment software
BLAST
Multiple Aligment
Clustal
MUSCLE (alignment software)
T-Coffee
Phylogenetics
List of phylogenetics software
List of phylogenetic tree visualization software
MEGA, Molecular Evolutionary Genetics Analysis
PHYLIP
Structure Prediction
List of RNA structure prediction software
List of protein structure prediction software
Motif Finder
Multiple EM for Motif Elicitation
Phyloscan
3D Structure
Structural bioinformatics
Open-Source Bioinformatics Software
List of open-source bioinformatics software
UGENE
BioPerl
Bioconductor
Biopython
Workflow
Bioinformatics workflow management system
Galaxy (computational biology)
Statistics
Regression analysis
Hidden Markov model
R (programming language)
Some Algorithms and Methods
Data mining
Sequential Pattern Mining
Smith–Waterman algorithm
Needleman–Wunsch algorithm
Dynamic programming
Cluster analysis
Bayesian network